张传伦

2018-04-27

  张传伦,南方科技大学海洋科学与工程系讲席教授。 1994年获得美国德州农工大(TAMU)博士学位,1994-1998年在美国橡树岭国家实验室从事博士后研究工作;1998-2022年任美国密苏里大学地质系助理教授;2002-2010年任美国佐治亚大学海洋系副教授;2009-2011年兼任同济大学海洋与地球科学学院访问教授;2010-2014年任美国佐治亚大学海洋系终身正教授;2012-2016年任同济大学海洋与地球科学学院讲座教授;2017-至今任南方科技大学海洋科学与工程系讲席教授,并兼任教学系副主任,致力于生物地球化学方向的研究和人才培养。

  主要研究方向为微生物在环境及能源、地质历史演化及全球变化中的作用;擅长整合脂类标记物、稳定同位素和分子DNA等交叉手段来研究微生物在全球碳氮循环中的作用;研究课题主要包括深部生物圈,热泉及其它极端环境地质微生物,天然气水合物生物地球化学,海洋和陆相古菌的生物地球化学过程及气候和环境变化指标的开发及应用。率先在墨西哥湾冷泉和甲烷水合物古菌脂类生物地球化学、热泉古菌脂类生物地球化学、和南海古菌脂类生物地球化学等方面开展相关研究工作,并取得了一系列创新成果发表在国际学术期刊;多次在美国地球物理年会 (American Geophysical Union)组织并主持专题会议。

  在国际地球科学和生命科学期刊上(包括“Science” 、“PNAS”、“Geology”、“Geochim. Cosmochim. Acta”、“ISME J”、“Environ. Microbiol.”)发表学术论文200余篇,其中>180篇被SCI收录,引用次数超过11679次,H-index为61。

  目前担任“微生物前沿(Frontiers in Microbiology-Biology of Archaea)”期刊主编 和“古菌(Archaea)”、“中国科学:地球科学”期刊编委。2001年获橡树岭联合性大学青年教授奖,2006年分享获得美国能源部100名科研开发奖,2007年获迈阿密大学校外优秀学者奖,2013和2014年两次获得“中国科学:地球科学”优秀编委奖。2016年六月被国际著名学术品牌美国“戈登科学前沿研究论坛-海洋生物地球化学”)推荐并选举为2018年会议副主席及2021年会议主席,为2019年古菌地球组学国际研讨会(International Workshop on Geo-Omics of Archaea)会议主席。

个人主页:张传伦 - 教师个人主页 - 南方科技大学 (sustech.edu.cn)(国内访问)Zhang Chuanlun - Faculty Profiles - SUSTech(国际访问)

教育背景:

1990/01—1993/12,美国德州农工大学,地质系,博士

1986/09—1989/12,美国德州农工大学,地质系,硕士

1980/09—1984/06,中国石油大学,地质系,学士

工作经历:

2017/01—至今,南方科技大学,海洋科学与工程系,教学系副主任,讲席教授

2012/01—2016/12,同济大学,海洋与地球科学学院,讲座教授

2010/12—2011/12,美国佐治亚大学,海洋学院,终身正教授

2009/08—2011/122,同济大学,海洋与地球科学学院,访问教授

2002/10—2010/12,美国佐治亚大学,海洋学院,副教授

2002/10—2007/09,美国佐治亚大学 Savannah 河生态实验室,副研究员

1998/09—2002/09,美国密苏里大学,地质系,助理教授

1994/05—1998/08,美国橡树岭国家实验室,博士后

 

论文

发表论文:

Chen S.Z., Tao J.C., Chen Y.F., Wang W.X., Fan* L. and Zhang* C.L. 2022. Interactions between marine group II archaea and phytoplankton revealed by population correlations in the northern coast of south china sea. Frontiers in Microbiology, 2022; 12 785532.

Hedlund* B.P., Zhang C.L., Wang F.P., Rinke C. and Martin W.F. 2022. Editorial: Ecology, metabolism and evolution of archaea-perspectives from proceedings of the international workshop on geo-omics of archaea. Frontiers in Microbiology, 2022; 12 827229.

Yang Y.Y., Zhang* C.L. Lenton T.M., Yan X.M., Zhu M.Y., Zhou M.D., Tao J.C., Phelps T.J., Cao* Z.W. 2021. The evolution pathway of ammonia-oxidizing archaea shaped by major geological events. Molecular Biology and Evolution, 2021;38 3637–3648.

Wang W.X., Tao J.C., Yu K., He C., Wang J.J., Li P.H., Chen H.M., Xu B., Shi, Q., and Zhang* C.L. 2021. Vertical stratification of dissolved organic matter linked to distinct microbial communities in subtropic estuarine sediments. Frontiers in Microbiology, 2021;12 697860.

Law* K.P., He W., Tao J.C., Zhang, C.L. 2021. Characterization of the exometabolome of nitrosopumilus maritimus SCM1 by liquid chromatography-ion mobility mass spectrometry. Frontiers in Microbiology, 2021;12 658781.

Wang H.L., Chen F., Zhang C.L., Wang M. and Kan* J.J. 2021. Estuarine gradients dictate spatiotemporal variations of microbiome networks in the Chesapeake Bay. Environmental Microbiome, 2021;16 22.

Wang Y., Xu J.B., Cui D.Y., Kong L.C., Chen S.Z., Xie* W. and Zhang* C.L. 2021. Classification and identification of archaea using single-cell raman ejection and artificial intelligence: Implications for investigating uncultivated microorganisms. Analytical Chenistry, 2021; 93 17012-17019.

Law* K.P., He W., Tao J.C., Zhang, C.L. 2021. A novel approach to characterize the lipidome of marine archaeon Nitrosopumilus maritimus by ion mobility mass spectrometry. Frontiers in Microbiology, 2021;12 735878.

焦念志*,刘纪化,石拓,张传伦,张永雨,郑强,陈泉睿,汤凯,王誉泽,董海良,唐剑武,叶思源,董双林,高坤山,张继红,薛强,李琦,贺志理,屠奇超,王法明,黄小平,白雁,潘德炉 2021. 实施海洋负排放践行碳中和战略.中国科学:地球科学,51(4):632–643.

姚文勇, 陈松泽*, 何炜, 周敬倬, 张传伦*  2021. 珠江口外东澳岛海域MG I古菌和藻类的昼夜变化关系的研究. 微生物学报, 1-17.

王誉泽, 鲁鋆, 刘纪化, & 张传伦2021. “三泵集成”打造海洋CO2负排放生态工程.中国科学院院刊,36(3), 9.

Yang Y.Y., Zhang* C.L. Lenton T.M., Yan X.M.,  Zhu M.Y., Zhou M.D., Tao J.C., Phelps T.J., Cao* Z.W. 2021. The evolution pathway of ammonia-oxidizing archaea shaped by major geological events. Molecular Biology and Evolution, 2021;38 3637–3648.

Law* K.P., He W., Tao J.C., Zhang, C.L. 2021. Characterization of the exometabolome of nitrosopumilus maritimus SCM1 by liquid chromatography-ion mobility mass spectrometry. Frontiers in Microbiology, 2021;12 658781.

姚文勇, 陈松泽, 何炜, 周敬倬, 张传伦(Zhang* C.L. ) 2021. 珠江口外东澳岛海域 MGI 古菌和藻类的昼夜变化关系的研究. 中国科学 地球科学. (已接收)

Wang W.X., Tao J.C., Yu K., He C., Wang J.J., Li P.H., Chen H.M., Xu B., Shi, Q., and Zhang* C.L. 2021. Vertical stratification of dissolved organic matter linked to distinct microbial communities in subtropic estuarine sediments. Frontiers in Microbiology, 2021;12 697860.

Law* K.P., Li X.X., Zhang C.L. 2020. Lipidomics in archaeal membrane adaptation to environmental stresses and growth conditions: A review of culture-based physiological studies. Science China Earth Sciences,2020;63(15), 790–807.

Wang W.X., Tao J.C., Liu H.D., Li P.H., Chen S.Z., Wang* P., Zhang* C.L. 2020. Contrasting bacterial and archaeal distributions relecting diferent geochemical processes in a sediment core from the Pearl River Estuary. AMB Express, 2020;10(1):16.

Ma C. L., Coffinet S., Lipp J. S., Hinrichs K. U., Zhang* C. L. 2020. Marine Group II Euryarchaeota contribute to the archaeal lipid pool in Northwestern Pacific Ocean surface waters. Frontiers in Microbiology, 2020;11:1034.

Zou D.Y., Pan J., Liu Z.B., Zhang C.L., Liu H., Li* M. 2020. The Distribution of Bathyarchaeota in Surface Sediments of the Pearl River Estuary Along Salinity Gradient. Frontiers in Microbiology, 2020;11:285.

Chen H., Zhang Y.H., Li Y.Y., Zhuo X.C., Li Y.G, Zhang C.L., Shi* Q. 2020. In-house Standard Method for Molecular Characterization of Dissolved Organic Matter by FT-ICR Mass Spectrometry. ACS Omega, 2020 5 (20), 11730-11736.

Fan* L, Wu D, Goremykin V, Xiao J, Xu Y, Garg S, Zhang C.L., Martin* WF, Zhu* R. Phylogenetic analyses with systematic taxon sampling show that mitochondria branch within  Alphaproteobacteria. Nature ecology&evolution ,10.1038/s41559-020-1239-x.

Qin* W, Zheng Y, Zhao* F, Wang Y, Urakawa H, Martens-Habbena W, Liu H, Huang X, Zhang X, Nakagawa T, Mende DR, Bollmann A, Wang B, Zhang Y, Amin SA, Nielsen JL, Mori K, Takahashi R, Virginia Armbrust E, Winkler MH, DeLong EF, Li M, Lee PH, Zhou J, Zhang C.L., Zhang T, Stahl DA, Ingalls* AE. Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea. The ISME journal, 10.1038/s41396-020-0710-7.

Li, M., Xie*, W., Li, P., Yin, K., & Zhang* C. L. 2020. Establishing a terrestrial proxy based on fluorescent dissolved organic matter from sediment pore waters in the East China Sea. Water research,182, 116005.

Chen S.Z., Wang* P., Liu H.D, Xie W., Wan S. X., Kao S.J., Phelps T.J., Zhang* C.L. 2019,Population dynamics of methanogens and methanotrophs along the salinity gradient in Pearl River Estuary: Implications for methane metabolism, Applied Microbiology and Biotechnology, Accepted

Zheng F.F., Chen Y.F., Tang X.T., Su J.Q., Zhu Y.G.,  Zhang* C.L. 2019. Changes in archaeal ether lipid composition in response to agriculture alternation in ancient and modern paddy soils, Organic Geochemistry, https://doi.org/10.1016/j.orggeochem.2019.103912.

Mei X, Li X.X., Wang Z.B., Zhang C.L., Zhang Y. 2019. Cross shelf transport of terrigenous organic matter in surface sediments from outer shelf to Okinawa Trough in East China Sea. Journal of Marine Systems, https://doi.org/10.1016/j.jmarsys.2019.103224.

Bao R., Jia G.D., Zhang C.L. 2019. Spatiotemporal variation of organic geochemical properties since the mid-Miocene in the deep South China Sea (IODP Expedition 349). Journal of Asian Earth Sciences, https://doi.org/10.1016/j.jseaes.2019.103961.

Wu W.Y., Xu Y., Hou S.N., Dong L., Liu H.D., Wang H.Y., Liu W.G., Zhang* C.L. 2019. Origin and preservation of archaeal intact polar tetraether lipids in deeply buried sediments from the South China Sea. Deep Sea Research Part I: Oceanographic Research Papers, https://doi.org/10.1016/j.dsr.2019.103107.

Wei W., Wang N.N., Cai L.L., Zhang C.L., Jiao  N.Z., Zhang R. 2019. Impacts of freshwater and seawater mixing on the production and decay of virioplankton in a subtropical estuary. Microbial ecology, https://doi.org/10.1007/s00248-019-01362-2.

He C., Pan Q., Li P.H., Xie W., He D., Zhang* C.L., Shi* Q. 2019. Molecular composition and spatial distribution of dissolved organic matter (DOM) in the Pearl River Estuary, China. Environmental Chemistry, https://doi.org/10.1071/EN19051.

Zheng F.F., Chen Y.F., Xie W., Chen S.Z., Liu H.D., Phelps T.J., Zhang* C.L. 2019. Diverse biological sources of core and intact polar isoprenoid GDGTs in terrace soils from southwest of China: Implications for their use as environmental proxies, Chemical Geology, 522, 108-120, https://doi.org/ 10.1016/j.chemgeo.2019.05.017

Law K.P., Zhang C.L. 2019. Current Progress and Future Trends of Mass Spectrometry-based Archaeal Lipidomics, Organic Geochemistry. doi: https://doi.org/10.1016/j.orggeochem.2019.04.001

Ta K.W., Peng X.T., Xu H.C., Du M.R., Chen S., Li J.W., Zhang C.L. 2019. Distributions and Sources of Glycerol Dialkyl Glycerol Tetraethers in Sediment Cores From the Mariana Subduction Zone. Journal of Geophysical Research: Biogeosciences. 124(4):857-869.

Li P.H., Tao J.C., Lin J., He C., Shi Q., Li X.X., Zhang C.L. 2019. Stratification of dissolved organic matter in the upper 2000m water column at the Mariana Trench, Science of the Total Environment, 668, 1222-1231, https://doi.org/10.1016/j.scitotenv.2019.03.094

Xiao J., Fan L, Wu D.F., Xu Y.B., Lai D.X., Martin W.F., Zhu R.X., Zhang C.L. 2019. Archaea, the tree of life, and cellular evolution in eukaryotes. Science China Earth Sciences, 62: 489–506, https://doi.org/10.1007/s11430-018-9326-1

程着, 谢伟, 张传伦*(Zhang C.L.). 2019  (in Chinese). 泉古菌醇与绿素在东海陆架区的分布及关系研究. 微生物学报. 1: 14.

肖静, 范陆, 吴顶峰, 徐雁冰, 赖登训, William F. Martin, 朱瑞新, 张传伦(Zhang C.L.). 2019. 古菌、生命树和真核细胞的功能演化. 中国科学: 地球科学. doi: 10.1360/N072018-0187.

Zhang *L., Lin J., Li S., Dong H., Wang F., Xie S. 2018. Tectonomicrobiology: A new paradigm for geobiological research. Science China-Earth Sciences. doi: 10.1007/s11430-017-9159-y.

Chen Y., Zheng F., Chen S., Liu H., Zhang* C.L. Branched GDGT production at elevated temperatures in anaerobic soil microcosm incubations. Organic Geochemistry. 117:12-21.

Xie* W., Luo H., Murugapian S.K., Dodsworth J.A., Chen S., Sun Y., Hedlund B.P., Wang P., Fang H., Deng M., Zhang* C. L. Localized high abundance of Marine group II archaea in the subtropical Pearl River Estuary: implications for their niche adaptation. Environmental microbiology, 20(2), 734-754. DOI: 10.1111/1462-2920.14004.

Zhang *L., Dang H.Y., Azam F., Benner R., Legendre L., Passow U., Polimene L., Robinson C., Suttle C.A.,  Jiao N.Z. 2018. Evolving Paradigms in Biological Carbon Cycling in the Ocean. National Science Review, https://doi.org/10.1093/nsr/nwy074.

Zhang* C.L. 2017. Untangling the role that microbes play in ocean carbon cycle ─ A new paradigm in marine biogeochemistry. Science China-Earth Sciences. 60(2):409-412.

Mou S.l., ZhangY.Y, Li G., Li H.M., Liang Y.T., Tang L.L., Tao J.C., Xu J.J., Li J., Zhang C.L., Jiao N.Z. 2017. Effects of ocean acidification and nitrogen supply on the growth and photosynthetic physiology of the marine cyanobacteria Synechococcus sp. PCC7002. Journal of Applied Phycology. 29:1755–1763.

WangH.Y., Liu W.G., Lu H.X., Zhang C.L. 2017. Potential degradation effect on paleo-moisture proxies based on the relative abundance of archaeal vs. bacterial tetraethers in loess-paleosol sequences on the Chinese Loess Plateau. 436: 173-180.

Shao L., Cui* Y.C., Qiao P.J., Zhang D.J., Liu X.Y., Zhang C.L. 2017.Sea-level changes and carbonate platform evolution of the Xisha Islands  (South China Sea) since the Early Miocene. Palaeogeography, Palaeoclimatology, Palaeoecology. 485:504-516.

Liu H., Zhang* C.L., Yang C., Chen S., Cao Z., Zhang Z. and Tian J. 2017. Marine Group II dominates planktonic archaea 1 in water columns of the northeastern South China Sea: Linkage to water mixing processes. Frontiers in Microbiology. DOI: 10.3389/fmicb.2017.01098.

Xie* W., Jiao N., Ma C., Fang S., Zhu* R.X, Zhang C.L. 2017. The response of archaeal species to seasonal variables in a subtropical aerated soil: insight into the low abundant methanogens. Appl Microbiol Biotechnol. DOI 10.1007/s00253-017-8349-7.

Zhang* Y., Liang P., Xie X., Dai X., Liu H., Zhang C.L., Kao S.J., Jiao N. 2017. Succession of bacterial community structure and potential significance along a sediment core from site U1433 of IODP expedition 349, South China Sea. Marine Geology. DOI: 10.1016/j.margeo.2017.06.010.

Wang J.X., Xie W., Zhang Y.G., Meador T., Zhang* C.L. 2017. Evaluating production of cyclopentyl tetraethers by Marine Group II Euryarchaeota in the Pearl River estuary and coastal South China Sea: Potential impact on the TEX86 paleothermometer. Frontiers in Microbiol. DOI: 10.3389/fmicb.2017.02077.

Guo W.T., Xie W., Li X.Y., Wang P., Hu A., Zhang* C.L. 2017. Environmental factors shaping the archaeal community structure and ether lipid distribution in a subtropic river and estuary, China. Appl Microbiol Biotechnol. DOI: 10.1007/s00253-017-8595-8.

He M.Q., Cai L.L., Zhang C.L., Jiao* N.Z., Zhang* R. 2017. Phylogenetic Diversity of T4-Type Phages in Sediments from the Subtropical Pearl River Estuary. Frontiers in Microbiol. DOI: 10.3389/fmicb.2017.00897.

Li* X.X., Zhang Z.R., Wade T.L., Knap A.H., Zhang* C.L. 2017. Sources and compositional distribution of organic carbon in surface sediments from the lower Pearl River to the coastal South China Sea. Journal of Geophysical Research: Biogeosciences. DOI:10.1002/2017JG003981

Li F.Y., Zheng F.F., Wang Y.L., Liu W.G., Zhang* C.L. 2017. Thermoplasmatales and Methanogens: Potential Association with the Crenarchaeol Production in Chinese soils. Frontiers in Microbiology. DOI: 10.3389/fmicb.2017.01200.

Wang H., Guo Z., Feng H., Chen Y., Chen X., Li Z., Hernández-Ascencio W., Dai X., Zhang Z., Zheng X., Mora-López M., Fu Y., Zhang C.L., Zhu P., Huang L. 2017. A novel Sulfolobus virus with an exceptional capsid architecture. J. Virol. DOI:10.1128/JVI.01727-17.

Xie* W., Luo H., Murugapian S.K., Dodsworth J.A., Chen S., Sun Y., Hedlund B.P., Wang P., Fang H., Deng M., Zhang* C L. 2017. Localized high abundance of Marine group II archaea in the subtropical Pearl River Estuary: implications for their niche adaptation. Environ. Microbiol. DOI:10.1111/1462-2920.14004.

 

科研

科研项目:

  1. 深圳市科技创新委员会,深圳市创新环境建设计划重点实验室, ZDSYS201802081843490,深圳海洋地球古菌组学重点实验室,2019-03至2021-09, 450万,在研,主持。
  2. 国家自然科学基金委员会,重大研究计划水圈计划,91851210,近海与河口MGII古菌的碳代谢机制及其群落互作关系的研究,2019-01至2022-12,280万, 在研,主持。
  3. 创新团队项目,青岛海洋科学与技术国家实验室,MGQNLM-TD201810,珠江口海洋沉积物古菌生物地球化学过程,2018-12至2020-12,30万,在研,主持。
  4. 国家自然科学基金委员会,重大研究计划水圈计划,41881260591,2018年海洋科技发展的国际热点与展望学术研讨会,2018-07至2018-12,1.15万,已结题,主持。
  5. 广东省自然科学基金,重点项目,2018B030311016,海洋古菌II降解有机质的分子机制及生态意义,2018-05至2021-04,50万,在研,主持。
  6. 国家科技部,全球变化及应对重点专项,2018YFA0605800,典型海洋环境惰性有机碳分布规律及其对环境变化的响应,2018-05至2023-04,248万,在研,第二课题负责人。
  7. 国家自然科学基金委员会,重点项目,41530105,海洋自养古菌(MGI)和异养古菌(MGII)在南海碳循环过程中的相互作用及沉积记录,2016-01至2020- 12,352万元,已结题,主持。
  8. 国家自然科学基金委员会,面上项目,41673073,东海沉积物中细菌和古菌醚脂化合物同向变化机制的研究,2017-01至2020-12,72万元,已结题,主持。
  9. 国家自然科学基金委员会,重大研发计划,91428308,南海碳循环与生物学储碳机制集成研究,2015-01至2018-12,40万,已结题,参加。
  10. 国家科技部,全球变化及应对重点专项,2016YFA0601101,海洋储碳机制及区域碳氮硫循环耦合对全球变化的响应,2016-07至2021-06,83万,在研,参加。
  11. 中央高校基本科研业务费专项基金,学科交叉重点类,南海氨氧化古菌与环境协同演化的分析模拟,2015-10至2018-09,80万,已结题,主持。
  12. 国家级一般级别,973子课题,2013CB955700,海洋微型生物碳泵储碳过程与机制研究,2013-01至2017-08,314万,已结题,主持。
  13. 国家自然科学基金委员会,面上项目,41373072,支链四醚膜脂化合物(bGDGT)在腾冲和西藏热泉中的微生物源鉴定及地球化学过程指示意义,2014- 01至2017-12,70万,已结题,主持。
  14. 上海市科学技术委员会,科研计划项目,13JC1405200,氨氧化古菌对土壤收支的贡献及在土壤碳循环中所起的作用,2013-09至2016-08,40万元,已结题,主持。
  15. 国家自然科学基金委员会,重大研究计划项目,91028005,南海水体中古菌的分布及生物地球化学功能,2011-01至2014-12,350万元,已结题,主持。
  16. 国家自然科学基金委员会,面上项目,40972211,腾冲及周边地区热泉古菌脂类标志物研究:环境因素,生物地理和微生物功能意义,2010-01至2012-12,56万元,已结题,主持。

教学

教学:

1998年起历任美国密苏里大学助理教授,开始长达20年的教学生涯,期间(1998-2002年)教授的课程主要有:地质微生物学和地球历史演化。2002年至2012年,美国佐治亚大学海洋系副教授,终身教授,教授的课程主要有:地质微生物学、极端环境生命课程和海洋科学导论。2012年至2016年,全职回国担任同济大学海洋与地球科学学院教授,教授的课程主要有:生物地球化学、海洋科学导论和地质微生物学; 2017年1月起任职南科大并兼任教学系副主任,讲席教授,创建了南方科技大学海洋地球古菌组学重点实验室,教授的课程主要有:海洋生态系统导论,微生物海洋学等。